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the GMOD database schema
PLpgSQL 47 22
Source code for JBrowse 2, a modern React-based genome browser
TypeScript 289 87
JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.
JavaScript 474 199
Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.
Groovy 140 86
Monorepo for Apollo 3 server-side and client-side (JBrowse 2 plugin) components.
Read JBrowse v1 nested containment list feature stores from modern JS
Read Tabix-indexed files, either with .tbi or .csi indexes, in node or the browser
Parse BAM and BAM index files in javascript for node and the browser
Read CRAM v3 and v2 in node or in the browser
Parser for bigwig and bigbed files
Nodejs filehandle for reading bgzip+.gzi compressed files
A parser for the BED format including autoSql support
Hierarchical clustering in javascript
Read UCSC Trix indexes in pure JavaScript
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